Table 3 Reference strains information
Strains | GenBank accession NO | Year | Area |
|---|---|---|---|
MN414 | KT581982.1 | 2005 | USA |
MN184B | DQ176020.1 | 2006 | USA |
NADC30 | JN654459.1 | 2012 | USA |
XW017 | KF724411.1 | 2013 | USA |
XW016 | KF724410.1 | 2013 | USA |
XW015 | KF724409.1 | 2013 | USA |
XW009 | KF724402.1 | 2013 | USA |
XW005 | KF724398.1 | 2013 | USA |
XW004 | KF724397.1 | 2013 | USA |
XW003 | KF724401.1 | 2013 | USA |
XW001 | KF632717.1 | 2013 | USA |
MN6 | KP283401.1 | 2014 | USA |
Minnesota7 | KP283409.1 | 2014 | USA |
Minnesota5 | KP283410.1 | 2014 | USA |
Minnesota4 | KP283411.1 | 2014 | USA |
Minnesota2 | KP283413.1 | 2014 | USA |
Minnesota17B | KP283402.1 | 2014 | USA |
Minnesota17A | KP283403.1 | 2014 | USA |
Minnesota16 | KP283404.1 | 2014 | USA |
JL580 | KR706343.1 | 2015 | China |
Iowa12 | KP283415.1 | 2015 | USA |
Illinois8 | KP283416.1 | 2015 | USA |
HNyc15 | KT945018.1 | 2015 | China |
HNjz15 | KT945017.1 | 2015 | China |
HENAN-XINX | KF611905.1 | 2015 | China |
FJZ03 | KP860909.1 | 2015 | China |
FJY04 | KP860910.1 | 2015 | China |
CHsx1401 | KP861625.1 | 2015 | China |
WUH6 | KU523367.1 | 2016 | China |
WUH5 | KU523366.1 | 2016 | China |
TJnh1501 | KX510269.1 | 2016 | China |
ISU67 | KT257986.1 | 2016 | USA |
ISU49 | KT257984.1 | 2016 | USA |
ISU40 | KT257982.1 | 2016 | USA |
ISU39 | KT257981.1 | 2016 | USA |
ISU37 | KT257980.1 | 2016 | USA |
ISU30 | KT257977.1 | 2016 | USA |
HNhx | KX766379.1 | 2016 | China |
HENZMD-9 | KU950374.1 | 2016 | China |
HENXX-1 | KU950372.1 | 2016 | China |
HENXC-4 | KU950371.1 | 2016 | China |
FJ1402 | KX169191.1 | 2016 | China |
109,560 | KT257958.1 | 2016 | USA |
101,416 | KT257955.1 | 2016 | USA |
21,675 | KT257954.1 | 2016 | USA |
TJnh1501 | KX510269.1 | 2017 | China |
SD-A19 | MF375260.1 | 2017 | China |
SC-d | MF375261.1 | 2017 | China |
IA/2013/ISU-1 | MF326988.1 | 2017 | USA |
HENXX-8 | KY041782.1 | 2017 | China |
HENJY-2 | KX900392.1 | 2017 | China |
FJWQ16 | KX758249.1 | 2017 | China |
FJM4 | KY412888.1 | 2017 | China |
FJLIUY-2017 | MG011718.1 | 2017 | China |
FJDJQ-2017 | MG011719.1 | 2017 | China |
15ZJ1 | KX815432.1 | 2017 | China |
15LN3 | KX815428.1 | 2017 | China |
15LN1 | KX815423.1 | 2017 | China |
15JX1 | KX815419.1 | 2017 | China |
15HEN4 | KX815415.1 | 2017 | China |
15HEN1 | KX815413.1 | 2017 | China |
TJZH-1607 | MH651748.1 | 2018 | China |
SDZC-1609 | MH651747.1 | 2018 | China |
SDYG1606 | KY053458.1 | 2018 | China |
SDQZ-1609 | MH651746.1 | 2018 | China |
SDQD-1604 | MH651742.1 | 2018 | China |
SD99-1606 | MH651745.1 | 2018 | China |
SD53-1603 | MH651744.1 | 2018 | China |
SD17-38 | MH068878.1 | 2018 | China |
SD-1602 | MH651743.1 | 2018 | China |
SCnj16 | MF196906.1 | 2018 | China |
SCN17 | MH078490.1 | 2018 | China |
SCcd17 | MG914067.1 | 2018 | China |
QHD3 | MH167388.1 | 2018 | China |
QHD2 | MH167387.1 | 2018 | China |
QHD1 | MG687491.1 | 2018 | China |
LNCH-1604 | MH651741.1 | 2018 | China |
IA14737-2016 | MF663706.1 | 2018 | USA |
HNJYH-1606 | MH651740.1 | 2018 | China |
HNJYF-1606 | MH651738.1 | 2018 | China |
HBFL-1604 | MH651739.1 | 2018 | China |
HB17A | MG844181.1 | 2018 | China |
CY2-1604 | MH651737.1 | 2018 | China |
CY1-1604 | MH651736.1 | 2018 | China |
SWU/YB2/2018 | MK429985.1 | 2019 | China |
SWU/YB1/2018 | MK429984.1 | 2019 | China |
SWU/MY6/2018 | MK429983.1 | 2019 | China |
SWU/MY5/2018 | MK429982.1 | 2019 | China |
SWU/MS3/2018 | MK429981.1 | 2019 | China |
SWU/MS2/2018 | MK429980.1 | 2019 | China |
SDbz16-2 | MH588710.1 | 2019 | China |
SCya18 | MK144543.1 | 2019 | China |
KU-N1702 | MK057531.1 | 2019 | Korea |
CH-WH-2019–1 | MK450333.1 | 2019 | China |
LNWK96 | MG860516.1 | 2018 | China |
LNWK130 | MG913987.1 | 2018 | China |
PRRSV-ZDXYL-China-2018–1 | MK453049.1 | 2018 | China |
PRRSV-ZDXYL-China-2018–2 | MK453050.1 | 2018 | China |
FJ0908 | MK202794.1 | 2018 | China |
HLJZD22-1812 | MN648450.1 | 2019 | China |
HLJZD30-1902 | MN648055.1 | 2019 | China |
LNDZD10-1806 | MN648054.1 | 2019 | China |
CH/2018/NCV-Anheal-1 | MH370474.1 | 2018 | China |
NC/2015/ISU-10 | KT257966.1 | 2016 | USA |
2020-Acheng-1 | MW079495.1 | 2020 | China |
HLJ/2017/921a_glycoprotein_5_(GP5) | MH422084.1 | 2017 | China |
HLJ/2017/921b_glycoprotein_5_(GP5) | MH422085.1 | 2017 | China |
HLJTZJ2260-2110_GP5_(ORF5) | OL546288.1 | 2021 | China |
HLJTZJ2259-2110_GP5_(ORF5) | OL546287.1 | 2021 | China |
HLJTZJ2258-2110_GP5_(ORF5) | OL546286.1 | 2021 | China |
HLJTZJ2257-2110_GP5_(ORF5) | OL546285.1 | 2021 | China |
HLJWK319-2001_GP5_(ORF5) | OL546284.1 | 2021 | China |
HLJWK475-2107_GP5_(ORF5) | OL546283.1 | 2021 | China |
JLWK413-2103_GP5_(ORF5) | OL546282.1 | 2021 | China |
JLWK412-2103_GP5_(ORF5) | OL546281.1 | 2021 | China |
HLJTZJ2211-2110_GP5_(ORF5) | OL546280.1 | 2021 | China |
HLJTZJ2209-2110_GP5_(ORF5) | OL546279.1 | 2021 | China |
HLJTZJ2164-2108_GP5_(ORF5) | OL546278.1 | 2021 | China |
SDTZJ2135-2107_GP5_(ORF5) | OL546277.1 | 2021 | China |
HLJTZJ2098-2107_GP5_(ORF5) | OL546276.1 | 2021 | China |
HLJTZJ2096-2107_GP5_(ORF5) | OL546275.1 | 2021 | China |
HLJTZJ2095-2107_GP5_(ORF5) | OL546274.1 | 2021 | China |
HLJTZJ2094-2107_GP5_(ORF5) | OL546273.1 | 2021 | China |
HLJTZJ2093-2107_GP5_(ORF5) | OL546272.1 | 2021 | China |
HLJTZJ2092-2107_GP5_(ORF5) | OL546271.1 | 2021 | China |
HLJTZJ2091-2107_GP5_(ORF5) | OL546270.1 | 2021 | China |
HLJTZJ2090H-2107_GP5_(ORF5) | OL546269.1 | 2021 | China |
HLJTZJ2089-2107_GP5_(ORF5) | OL546268.1 | 2021 | China |
HLJTZJ2088-2107_GP5_(ORF5) | OL546267.1 | 2021 | China |
HLJTZJ2087-2107_GP5_(ORF5) | OL546266.1 | 2021 | China |
HLJTZJ2086H-2107_GP5_(ORF5) | OL546265.1 | 2021 | China |
HLJTZJ2086-2107_GP5_(ORF5) | OL546264.1 | 2021 | China |
HLJTZJ2082-2107_GP5_(ORF5) | OL546263.1 | 2021 | China |
HLJTZJ2081-2107_GP5_(ORF5) | OL546262.1 | 2021 | China |
HLJTZJ2080-2107_GP5_(ORF5) | OL546261.1 | 2021 | China |
HLJTZJ2079-2107_GP5_(ORF5) | OL546260.1 | 2021 | China |
HLJTZJ2072-2107_GP5_(ORF5) | OL546259.1 | 2021 | China |
HLJTZJ2071-2107_GP5_(ORF5) | OL546258.1 | 2021 | China |
HLJTZJ2070-2107_GP5_(ORF5) | OL546257.1 | 2021 | China |
HLJTZJ2068-2107_GP5_(ORF5) | OL546256.1 | 2021 | China |
HLJTZJ2066-2107_GP5_(ORF5) | OL546255.1 | 2021 | China |
HLJTZJ2065-2107_GP5_(ORF5) | OL546254.1 | 2021 | China |
HLJTZJ2060-2107_GP5_(ORF5) | OL546253.1 | 2021 | China |
JLTZJ2053-2107_GP5_(ORF5) | OL546252.1 | 2021 | China |
SDTZJ2039-2107_GP5_(ORF5) | OL546251.1 | 2021 | China |
JSTZJ2028-2106_GP5_(ORF5) | OL546250.1 | 2021 | China |
JSTZJ2027-2106_GP5_(ORF5) | OL546249.1 | 2021 | China |
JSTZJ2026-2106_GP5_(ORF5) | OL546248.1 | 2021 | China |
HLJTZJ2018-2106_GP5_(ORF5) | OL546247.1 | 2021 | China |
HLJTZJ2013-2106_GP5_(ORF5) | OL546246.1 | 2021 | China |
HLJTZJ2012-2106_GP5_(ORF5) | OL546245.1 | 2021 | China |
HLJTZJ2009-2106_GP5_(ORF5) | OL546244.1 | 2021 | China |
HLJTZJ2008-2106_GP5_(ORF5) | OL546243.1 | 2021 | China |
HLJTZJ2000-2106_GP5_(ORF5) | OL546242.1 | 2021 | China |
HLJTZJ1997-2106_GP5_(ORF5) | OL546241.1 | 2021 | China |
HBTZJ1519-2012_GP5_(ORF5) | OL546240.1 | 2021 | China |
THLJTZJ1293-2012_GP5_(ORF5) | OL546239.1 | 2021 | China |
HLJTZJ1292-2012_GP5_(ORF5) | OL546238.1 | 2021 | China |
HLJTZJ1291-2012_GP5_(ORF5) | OL546237.1 | 2021 | China |
HLJTZJ1290-2012_GP5_(ORF5) | OL546236.1 | 2021 | China |
HLJTZJ1288-2012_GP5_(ORF5) | OL546235.1 | 2021 | China |
HLJTZJ1106-2011_GP5_(ORF5) | OL546234.1 | 2021 | China |
HLJTZJ1103-2011_GP5_(ORF5) | OL546233.1 | 2021 | China |
HLJTZJ1102-2011_GP5_(ORF5) | OL546232.1 | 2021 | China |
HLJTZJ1044-2011_GP5_(ORF5) | OL546231.1 | 2021 | China |
HLJTZJ1034-2011_GP5_(ORF5) | OL546230.1 | 2021 | China |
HLJTZJ1033-2011_GP5_(ORF5) | OL546229.1 | 2021 | China |
HLJTZJ1032-2011_GP5_(ORF5) | OL546228.1 | 2021 | China |
HBTZJ997-2011_GP5_(ORF5) | OL546227.1 | 2021 | China |
HLJTZJ928-2011_GP5_(ORF5) | OL546226.1 | 2021 | China |
HLHDZD32-1901 | MN648449.1 | 2019 | China |
HLJZD30-1902 | MN648055.1 | 2019 | China |
IA/2014/NADC34 | MF326985.1 | 2017 | USA |
JXA1 | EF112445.1 | 2016 | China |
VR2332 | EF536003.1 | 2014 | USA |
CH-1a | AY032626.1 | 2016 | China |
QYYZ | JQ308798.1 | 2012 | China |
RespPRRS_MLV | AF066183.4 | 2016 | USA |